python313Packages.cnvkit 0.9.13 single outdated
Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data
- Name
python3.13-cnvkit-0.9.13- Package set
- python313Packages
- Homepage
- https://cnvkit.readthedocs.io
- License
- Apache-2.0
- Source
- pkgs/development/python-modules/cnvkit/default.nix:135
- Derivation
/nix/store/86dsnb5ickrv5f5cdwhs0hd7sc2i93w2-python3.13-cnvkit-0.9.13.drv- Repology
- outdated, newest version is 0.9.14 · python:cnvkit (as of 2026-10-07T10:23:38Z)
Maintainers 1
| Handle | Name | Contact | Via |
|---|---|---|---|
| jbedo | Justin Bedő | GitHub · cu@cua0.org · @jb:vk3.wtf | listed on package |
Dependencies 30
| Package | As | Maintainers | Used by (transitive) | Status |
|---|---|---|---|---|
| python313 3.13.15 | propagatedBuildInputs | 13,660 | team-only outdated | |
| python313Packages.biopython 1.86 | propagatedBuildInputs | 4 | single outdated | |
| python313Packages.matplotlib 3.11.1 | propagatedBuildInputs | 4,079 | maintained outdated | |
| python313Packages.numpy 2.5.2 | propagatedBuildInputs | 5,137 | single outdated | |
| python313Packages.pandas 3.0.4 | propagatedBuildInputs | 4,054 | single outdated | |
| python313Packages.pomegranate 1.1.0 | propagatedBuildInputs | 1 | single outdated | |
| python313Packages.pyfaidx 0.9.0.4 | propagatedBuildInputs | 1 | single | |
| python313Packages.pyparsing 3.3.2 | propagatedBuildInputs | 4,169 | single outdated | |
| python313Packages.pysam 0.23.3 | propagatedBuildInputs | 4 | single outdated | |
| python313Packages.reportlab 5.0.1 | propagatedBuildInputs | 27 | unmaintained | |
| python313Packages.scikit-learn 1.9.0 | propagatedBuildInputs | 244 | single outdated | |
| python313Packages.scipy 1.18.1 | propagatedBuildInputs | 1,338 | single | |
| R 4.6.1 | buildInputs | 52 | maintained | |
| ensureNewerSourcesForZipFilesHook 26.05pre-git | nativeBuildInputs | 74,596 | unmaintained setup hook | |
| makeWrapper 26.05pre-git | nativeBuildInputs | 76,854 | unmaintained setup hook | |
| python313Packages.pypaBuildHook 26.05pre-git | nativeBuildInputs | 11,598 | unmaintained setup hook | |
| python313Packages.pypaInstallHook 26.05pre-git | nativeBuildInputs | 11,625 | unmaintained setup hook | |
| python313Packages.pytestCheckHook 26.05pre-git | nativeBuildInputs | 10,182 | unmaintained setup hook | |
| python313Packages.pythonCatchConflictsHook 26.05pre-git | nativeBuildInputs | 11,609 | unmaintained setup hook | |
| python313Packages.pythonImportsCheckHook 26.05pre-git | nativeBuildInputs | 11,642 | unmaintained setup hook | |
| python313Packages.pythonMetadataCheckHook 26.05pre-git | nativeBuildInputs | 11,597 | single setup hook | |
| python313Packages.pythonNamespacesHook 26.05pre-git | nativeBuildInputs | 11,634 | unmaintained setup hook | |
| python313Packages.pythonOutputDistHook 26.05pre-git | nativeBuildInputs | 74,564 | unmaintained setup hook | |
| python313Packages.pythonRelaxDepsHook 26.05pre-git | nativeBuildInputs | 11,601 | unmaintained setup hook | |
| python313Packages.pythonRemoveBinBytecodeHook 26.05pre-git | nativeBuildInputs | 74,584 | unmaintained setup hook | |
| python313Packages.pythonRemoveTestsDirHook 26.05pre-git | nativeBuildInputs | 11,634 | unmaintained setup hook | |
| python313Packages.pythonRuntimeDepsCheckHook 26.05pre-git | nativeBuildInputs | 11,611 | unmaintained setup hook | |
| python313Packages.wrapPython 26.05pre-git | nativeBuildInputs | 11,634 | unmaintained setup hook | |
| bashNonInteractive 5.3p15 | other input | 102,441 | maintained outdated | |
| stdenv 26.05pre-git | other input | 90,330 | team-only |
Used by 0 directly, 0 transitively
No package depends on this one.